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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:25:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:692521349-692521369
ATCAACATCTTCACATCTATTGGGCTCGGT692521349GGCATTACAGAGAACTTGAGAGAATATTTGAAGAATATGCCTCGTCGTATC
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:598373931-598373951
ATCAACTTCTTCATATCTATTGGGCTCAGC598373931GGCATTACAGAGAACTTGAGAGAATATTTGAAGAATATGCCTCATCATATA
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:599673454-599673474
GATACGACGAGGCATATTCTTCAAATATTC599673454TCTCAAGTTCTCTGTAATGCCACCGAGGCCAATAGATGTGAAGAAGTTGAT
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:600708960-600708980
GATATGACGAGGCATATTCTTCAAAAATTC600708960TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAGATGTGGAGAAGTTGAT
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:613287739-613287759
GATACGACGAGGCATATTCTTTAAGTATTC613287739TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:613747072-613747092
GATACGACGAGGCATATTCTTTAAGTATTC613747072TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:614432166-614432186
GATACGACGAGGCATATTCTTTAAGTATTC614432166TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:614908279-614908299
GATACGACGAGGCATATTCTTTAAGTATTC614908279TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:615621834-615621854
GATACGACGAGGCATATTCTTTAAGTATTC615621834TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:616060963-616060983
GATACGACGAGGCATATTCTTTAAGTATTC616060963TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:616609733-616609753
GATACGACGAGGCATATTCTTTAAGTATTC616609733TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:617098618-617098638
GATACGACGAGGGATATTCTTTAAGTATTC617098618TCTCAAGTTCTCTGTAATGCCACCGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:617596938-617596958
GATACGACGAGGCATATTCTTTAAGTATTC617596938TCTCAAGTTCTCTGTAATGCCACTGAGTCCAATAAATGTGAAGAAGTTGAG
Sambucus nigra genome assembly, chromosome: 11.
OX422217.1:73994588-73994608
GATAAGACGAGGCATATTCTTCAAATATTC73994588TCTCAAGTTCTCTGTAATGCCACCAAGCCCAATAGATGTGAAGAAGTTGAT
Tipula helvola genome assembly, chromosome: 3.
OY744483.1:288249133-288249153
TTTGAATGCTTGAAATCTGCACTATGTACA288249133TCTCAAGTTCTCTGTAATGCCAACTATACACAACCGTTTTTTATACAGTGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/GGCATTACAGAGAACTTGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : GGCATTACAGAGAACTTGAGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=GGCATTACAGAGAACTTGAGA&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCAAGTTCTCTGTAATGCC&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.009 | cgi_end;

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